I don't have time right now to read all the replies so I apologize if anyone has already said this ...
I'd take another obedience class when you get your Rottie. I think its good for everyone to go through at least one full 8-week course. I don't know why the clicker training didn't work for you, but Rotties can be a bit harder to train than other dogs (not bad, just sometimes more of a challenge), so it'll really help to go through a class with him/her.
Also, in my opinion, you can have just as many behavioral issues with a puppy from a breeder as one from a shelter. I think if socialization is an issue, I'd adopt from a Rottie rescue, as they are in foster homes and you could probably easily find a young pup who has been properly socialized by the foster mommy.
Alyson
Shiloh, Reece, Lolly, Skylar
and fosters Snickers, Missy, Magic, Merlin, Maya
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